The detailed information of tRNA gene sequence


Sequence ID>SRA1013270
Genome IDSRR020514.108798
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 220
End posion on genome 144
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agttgtttct
tRNA gene sequence 
GCCAGGGTAGCTCAGTTGGTTAGAGCGAGGGAATCATAACCCCTAGGTCGGCGGTTCGAT
TCCGCCCTCTGGCACCA
Downstream region at tRNA end position 
tttcaaagcc
Secondary structure (Cloverleaf model)
>SRA1013270	Met	CAT
                   t      ACCA tttcaaagcc
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G + T
                     G - C          T T
                    T     C C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A - T
                    G - C
                    G - C
                    G - C
                    A   C
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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