The detailed information of tRNA gene sequence


Sequence ID>SRA1013271
Genome IDSRR020514.108962
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 49
End posion on genome 125
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gcattccagt
tRNA gene sequence 
CGGTGAGTGGCGCAGCTTGGTAGCGCACTTGTTTTGGGTACAAGGGGTCGCAGGTTCAAA
TCCTGTCTCACCGACCA
Downstream region at tRNA end position 
tttatgcttt
Secondary structure (Cloverleaf model)
>SRA1013271	Pro	TGG
                   t      ACCA tttatgcttt
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    T - A
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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