The detailed information of tRNA gene sequence


Sequence ID>SRA1013284
Genome IDSRR020514.117812
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 221
End posion on genome 147
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnga
tRNA gene sequence 
CGCGGGGTGGAGCAGTGGTAGCTTGTCGGGCTCATAACCCGGAGGTCGCAGGTTCGAGTC
CTGCCCCCGCTACCA
Downstream region at tRNA end position 
aagttttcaa
Secondary structure (Cloverleaf model)
>SRA1013284	Met	CAT
                   a      ACCA aagttttcaa
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G T C C     A
        G A        G      | | | | |     G
      T     C G A G       G C A G G     C
      G     | | | +                 T T
      G     G C T T
        T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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