The detailed information of tRNA gene sequence


Sequence ID>SRA1013289
Genome IDSRR020514.124123
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 190
End posion on genome 113
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccaagtgcgc
tRNA gene sequence 
AGCGGGTTGGAGTAGCCAGGTTATCTCGTCGGGCTCATAACCCGGAGACCGGTGGTTCAA
ATCCACCACCCGCTACCA
Downstream region at tRNA end position 
cggtcgaaac
Secondary structure (Cloverleaf model)
>SRA1013289	Met	CAT
                   c      ACCA cggtcgaaac
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C C A C C     A
    C C G A        G      | | | | |     A
  A         T G A G       G G T G G     C
  G           | | |                 T T
  G         T C T C
    T T A          G     AGACC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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