The detailed information of tRNA gene sequence


Sequence ID>SRA1013291
Genome IDSRR020514.124472
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 113
End posion on genome 24
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatagaagcc
tRNA gene sequence 
GGAGAGATGTGAGAGCGGTTTAATCAGCACGCTTGGAAAGCGTGTATAGTGGCAACACTA
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aaaaactaga
Secondary structure (Cloverleaf model)
>SRA1013291	Ser	GGA
                   c      GCCA aaaaactaga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G A G T       G A G G G     C
    G         | | |                 T T
    T       A T C A
      T T A        G     TATAGTGGCAACACTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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