The detailed information of tRNA gene sequence


Sequence ID>SRA1013293
Genome IDSRR020514.126345
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 238
End posion on genome 163
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
aactttttgc
tRNA gene sequence 
GCCCTCATAGCTCAATTGGTAGAGCAACTGATTTGTAATCAGTAGGTTCGCGGTTCGAGT
CCGTGTGGGGGCACCA
Downstream region at tRNA end position 
gtcatgaaaa
Secondary structure (Cloverleaf model)
>SRA1013293	Thr	TGT
                   c      ACCA gtcatgaaaa
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     C - G
                     A - T          T G
                    T     G T G C C     A
      T A A        A      | + | | |     G
    T       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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