The detailed information of tRNA gene sequence


Sequence ID>SRA1013309
Genome IDSRR020514.136321
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 164
End posion on genome 69
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cagtattatg
tRNA gene sequence 
GGGAATGATTGCGCGGCTGGTGCCCGCCGCGGTCTTCAAAACCGTTGTCCCGGTGCTGAA
TCGGGAGCTGGGTTCGATTCCCAGGCGTTCCCGCCA
Downstream region at tRNA end position 
tttcaaaatc
Secondary structure (Cloverleaf model)
>SRA1013309	SeC	TCA
                   g      GCCA tttcaaaatc
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     A   G          T T
                    T     G A C C C     A
      C G G        T      | | | | |     G
    T       C G C G       C T G G G     C
    G         | | |                 T T
    G       C C G C
      T G C        C     TGTCCCGGTGCTGAATCGGGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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