The detailed information of tRNA gene sequence


Sequence ID>SRA1013311
Genome IDSRR020514.136760
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 196
End posion on genome 107
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaaataagcc
tRNA gene sequence 
GGAGAGATGTGAGAGCGGTTTAATCAGCACGCTTGGAAAGCGTGTATAGTGGCAACACTA
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aatacttgat
Secondary structure (Cloverleaf model)
>SRA1013311	Ser	GGA
                   c      GCCA aatacttgat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G A G T       G A G G G     C
    G         | | |                 T T
    T       A T C A
      T T A        G     TATAGTGGCAACACTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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