The detailed information of tRNA gene sequence


Sequence ID>SRA1013328
Genome IDSRR020514.146758
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 115
End posion on genome 24
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tacatctcta
tRNA gene sequence 
GGAGAGATGGGTGAGTGGTTTAAACCAGTCGTTTGCTAAATGACCGTACGTGGAAACATG
TACCGAGAGTTCGAATCTCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttttagtagt
Secondary structure (Cloverleaf model)
>SRA1013328	Ser	GCT
                   a      GCCA ttttagtagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G A G     C
    G         | | |                 T T
    T       A A C C
      T T A        A     CGTACGTGGAAACATGTACC
                    G - C
                    T - A
                    C - G
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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