The detailed information of tRNA gene sequence


Sequence ID>SRA1013332
Genome IDSRR020514.148252
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 185
End posion on genome 261
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aactaaccaa
tRNA gene sequence 
TCGGGCGTAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCAGGTTCAAA
TCCTGCCGCCCCGACCA
Downstream region at tRNA end position 
ttaattgaaa
Secondary structure (Cloverleaf model)
>SRA1013332	Pro	TGG
                   a      ACCA ttaattgaaa
                     T + G
                     C   C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | | | |     A
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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