The detailed information of tRNA gene sequence


Sequence ID>SRA1013333
Genome IDSRR020514.148381
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 162
End posion on genome 75
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctggtacttt
tRNA gene sequence 
GGAGAGGTGACCGAGTGGTTTAAGGTGCTCGCCTGGAACGCGAGTGTAGGTTAACGCCTA
CCGTGGGTTCGAATCCCACCTTCTCCGCat
Downstream region at tRNA end position 
tttacttaat
Secondary structure (Cloverleaf model)
>SRA1013333	Ser	GGA
                   t      GCat tttacttaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G T G G G     C
    G         | | |                 T T
    T       A G G T
      T T A        G     TGTAGGTTAACGCCTACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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