The detailed information of tRNA gene sequence


Sequence ID>SRA1013340
Genome IDSRR020514.150596
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 18
End posion on genome 93
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaatgcaggt
tRNA gene sequence 
GGGCCGGTAGCTCAGTGGTTAGAGCAGGCGACTCATAATCGCTCGGTCGTGGGTTCGATC
CCCGCCCGGCCCACGA
Downstream region at tRNA end position 
ggtccgacca
Secondary structure (Cloverleaf model)
>SRA1013340	Met	CAT
                   t      ACGA ggtccgacca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          C T
                    T     C G C C C     A
      T G A        A      | + | | |     G
    G       C T C G       G T G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     CGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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