The detailed information of tRNA gene sequence


Sequence ID>SRA1013345
Genome IDSRR020514.152814
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 206
End posion on genome 130
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnnnnnnnaa
tRNA gene sequence 
GGGCGCTTAGCTCAGCTTGGAAGAGCACCTGGTTTGCAACCAGGTGGCCGGGGGTTCAAA
TCCCCCAGCGTCCACCA
Downstream region at tRNA end position 
ctattctcgg
Secondary structure (Cloverleaf model)
>SRA1013345	Ala	TGC
                   a      ACCA ctattctcgg
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     C - G
                     T - A          T A
                    T     C C C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G A A        A     TGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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