The detailed information of tRNA gene sequence


Sequence ID>SRA1013410
Genome IDSRR020514.179178
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 71
End posion on genome 147
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
ccccatttgt
tRNA gene sequence 
GCGCCTGTAGCTCAGCTGGATAGAGCAGTGGACTTCGAATCCAAAGGTCGCAGGTTCGAA
TCCTGCCAGGCGTGCCA
Downstream region at tRNA end position 
ttattaggtt
Secondary structure (Cloverleaf model)
>SRA1013410	Arg	TCG
                   t      GCCA ttattaggtt
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    G   A
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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