The detailed information of tRNA gene sequence


Sequence ID>SRA1013419
Genome IDSRR023396.6893
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 175
End posion on genome 97
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
aaaagcaagT
tRNA gene sequence 
CGGGGTGTAGCGCAGCCAGGTAGCGCACCTGAATGGGGTTCAGGTGGTCGCCGGTTCAAA
TCCGGCCACCCCGACCC
Downstream region at tRNA end position 
Atagatagga
Secondary structure (Cloverleaf model)
>SRA1013419	Pro	GGG
                   T      ACCC Atagatagga
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G G C C     A
      C G A        A      | | | | |     A
    C       C G C G       G C C G G     C
    A       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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