The detailed information of tRNA gene sequence


Sequence ID>SRA1013422
Genome IDSRR023396.15870
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 75
End posion on genome 149
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tacatcttaa
tRNA gene sequence 
CGCGGGGTGGAGCAGTGGAAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCGAATC
CAACCCCCGCTACCA
Downstream region at tRNA end position 
atgagattaa
Secondary structure (Cloverleaf model)
>SRA1013422	Met	CAT
                   a      ACCA atgagattaa
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A A C C     A
        G A        G      | | | | |     G
      T     C G A G       G T T G G     C
      G     | | | |                 T T
      G     G C T C
        A A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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