The detailed information of tRNA gene sequence


Sequence ID>SRA1013425
Genome IDSRR023396.17777
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 197
End posion on genome 268
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
atttttggat
tRNA gene sequence 
GGGCCTGTAGTATAATGGTAGAACACCGCTCTCACACGGCGGGGGTTCCGGTTCGAATCC
GGGCAGGCCCACtt
Downstream region at tRNA end position 
ctnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1013425	Val	CAC
                   t      ACtt ctnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     G G G C C     A
        A A        A      + | | | |     G
      T     T A T G       T C C G G     C
      G     +   | |                 T T
      G     G A A C
        T A        A     GGGT
                    C - G
                    C - G
                    G - C
                    C - G
                    T + G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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