The detailed information of tRNA gene sequence


Sequence ID>SRA1013428
Genome IDSRR023396.23599
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 259
End posion on genome 175
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ttagctttaa
tRNA gene sequence 
GCCGGGGTGGCGGAATAGGCAGACGCAGCGGACTTAAAATCCGCCGGAGCAATCCTTGTG
GGTTCGAGTCCCGCCCCCGGCACCA
Downstream region at tRNA end position 
ttagagaata
Secondary structure (Cloverleaf model)
>SRA1013428	Leu	TAA
                   a      ACCA ttagagaata
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G C C C     A
      T A A        G      | + | | |     G
    A       G G C G       G T G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     CGGAGCAATCCTT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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