The detailed information of tRNA gene sequence


Sequence ID>SRA1013432
Genome IDSRR023396.28327
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 131
End posion on genome 48
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
tctgggttgc
tRNA gene sequence 
GCGGGGGTGTCCGAGTGGTCAAAGGAGCAAGGCTTAGGACCTTGTCGCGTAGGCGTTCGT
GGGTTCGAACCCCACCCTCCGCACtt
Downstream region at tRNA end position 
cacaagcttc
Secondary structure (Cloverleaf model)
>SRA1013432	Leu	TAG
                   c      ACtt cacaagcttc
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C          C A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      C A A        G     TCGCGTAGGCGTTC
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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