The detailed information of tRNA gene sequence


Sequence ID>SRA1013440
Genome IDSRR023396.40033
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 260
End posion on genome 186
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
aggtattcat
tRNA gene sequence 
TCCCCGGTAGCTCAATGGTAGAGTGGGCGGCTGTTAACCGCTTGGTTGCAGGTTCGAGTC
CTGCCCGGGGAGCCA
Downstream region at tRNA end position 
agtctgaggg
Secondary structure (Cloverleaf model)
>SRA1013440	Asn	GTT
                   t      GCCA agtctgaggg
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     C G T C C     A
        A A        A      | | | | |     G
      T     C T C G       G C A G G     C
      G     | | | +                 T T
      G     G A G T
        T A        G     TGGTT
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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