The detailed information of tRNA gene sequence


Sequence ID>SRA1013457
Genome IDSRR023396.67605
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 157
End posion on genome 85
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ggctcactcg
tRNA gene sequence 
GTCCCCATAGTCTAACGGACAGGACACTGGGTTTTCATCCCAGCGATGGGGGTTCGACTC
CCCCTGGGGGCACgc
Downstream region at tRNA end position 
ggggttagct
Secondary structure (Cloverleaf model)
>SRA1013457	Glu	TTC
                   g      ACgc ggggttagct
                     G - C
                     T + G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T C
                    T     C C C C C     A
      C A A        A      | | | | |     G
    G       T C T G       G G G G G     C
    G       + | | |                 T T
    A       G G A C
      C A          A     CGAT
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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