The detailed information of tRNA gene sequence


Sequence ID>SRA1013469
Genome IDSRR023396.78437
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 88
End posion on genome 163
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gtatgggttt
tRNA gene sequence 
GGGCGGGTAGATCAGCCTGGAATGATCGCGACGTTGGCATCGTCGAGGTCCGGGGTTCAA
ATCCCCGCCCGTCCACtg
Downstream region at tRNA end position 
aacttttccc
Secondary structure (Cloverleaf model)
>SRA1013469	Ala	GGC
                   t      ACtg aacttttccc
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     G C C C C     A
    C C G A        A      | | | | |     A
  T         C T A G       C G G G G     C
  G         | | | |                 T T
  G         G A T C
    A A T          G     AGGTC
                    C - G
                    G - C
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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