The detailed information of tRNA gene sequence


Sequence ID>SRA1013488
Genome IDSRR023396.102568
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 265
End posion on genome 192
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
nnnnnnnnng
tRNA gene sequence 
GCGGGATTAGTATAGTGGTAGTACGCAACCTTCCCAAGGTTGATGCGCCAGTTCGATCCT
GGTATCCCGCTCAA
Downstream region at tRNA end position 
gtattctcta
Secondary structure (Cloverleaf model)
>SRA1013488	Gly	CCC
                   g      TCAA gtattctcta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A          C T
                    T     T G G T C     A
        G A        A      + | | | |     G
      T     T A T G       G C C A G     C
      G     + | | |                 T T
      G     G T A C
        T A        G     ATGC
                    C - G
                    A - T
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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