The detailed information of tRNA gene sequence


Sequence ID>SRA1013490
Genome IDSRR023396.104500
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 178
End posion on genome 104
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
catcaggtaa
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGCTAGAGCGCTACGTTGACATCGTAGAGGTCACAAGTTCAAG
TCTTGTACCGCCCACtg
Downstream region at tRNA end position 
aaaaggctgt
Secondary structure (Cloverleaf model)
>SRA1013490	Val	GAC
                   a      ACtg aaaaggctgt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T G
                    T     T G T T C     A
      T G A        A      | | | | |     A
    T       C T C G       A C A A G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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