The detailed information of tRNA gene sequence


Sequence ID>SRA1013491
Genome IDSRR023396.109403
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 176
End posion on genome 86
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtaataaaag
tRNA gene sequence 
GGAGAGGTACGGAAGTGGTTATAACCGGACGGTCTCGAAAACCGTTTGACCTTTCGGGGT
CGCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
actgggatat
Secondary structure (Cloverleaf model)
>SRA1013491	Ser	CGA
                   g      GCCA actgggatat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G G C       G T G G G     C
  T           | | |                 T T
  T         A C C G
    A T A          G     TTGACCTTTCGGGGTCGC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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