The detailed information of tRNA gene sequence


Sequence ID>SRA1013498
Genome IDSRR023396.126756
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 134
End posion on genome 206
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
atgctacttc
tRNA gene sequence 
GGGGCCATAGCTCAGTTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCGTGGGTTCGAAT
CCCATTGGCTCCAttt
Downstream region at tRNA end position 
tcatatcttc
Secondary structure (Cloverleaf model)
>SRA1013498	Ala	GGC
                   c      Attt tcatatcttc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     T A C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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