The detailed information of tRNA gene sequence


Sequence ID>SRA1013513
Genome IDSRR023396.145479
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 86
End posion on genome 160
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tcattagaac
tRNA gene sequence 
CGGGGCGTGGCGCAGTCTGGTTAGCGCACAGCGTTCGGGACGCTGGGGTCAGGGGTTCGA
ATCCCCTCGCCCCGAttt
Downstream region at tRNA end position 
ttctttatat
Secondary structure (Cloverleaf model)
>SRA1013513	Pro	CGG
                   c      Attt ttctttatat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C C C C     A
    C T G A        G      | | | | |     G
  T         C G C G       A G G G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          A     GGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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