The detailed information of tRNA gene sequence


Sequence ID>SRA1013526
Genome IDSRR023396.165439
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 39
End posion on genome 113
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
gtttgattat
tRNA gene sequence 
GCGCCTGTAGCTCAGCTGGATAGAGCGCCGGACTTCGAATCCGATGGTCGGAGGTTCGAA
TCCTCTCAGGCGTGCtt
Downstream region at tRNA end position 
aacatatatg
Secondary structure (Cloverleaf model)
>SRA1013526	Arg	TCG
                   t      GCtt aacatatatg
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     TGGTC
                    C   A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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