The detailed information of tRNA gene sequence


Sequence ID>SRA1013534
Genome IDSRR023396.177496
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 6
End posion on genome 82
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
nnnnnctgtg
tRNA gene sequence 
GTGAGTGTAGCCCAGTGGTCTAAGGCGCCAGGTTGTGGCCCTGGAGAACGAGGGTTCAAA
TCCCTCCACTCACCCCA
Downstream region at tRNA end position 
ctccaagcgc
Secondary structure (Cloverleaf model)
>SRA1013534	His	GTG
                   g      CCCA ctccaagcgc
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     A
    G       C C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     AGAAC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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