The detailed information of tRNA gene sequence


Sequence ID>SRA1013537
Genome IDSRR023396.178804
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 178
End posion on genome 254
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acaaagacat
tRNA gene sequence 
GGCGGTGTAGCTCAGATGGTTAGAGCATGCGGCTCATATCCGCAGTGTCCGGGGTTCAAT
TCCCTGCACCGCCACCT
Downstream region at tRNA end position 
attttttccc
Secondary structure (Cloverleaf model)
>SRA1013537	Met	CAT
                   t      ACCT attttttccc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     G T C C C     A
      A G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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