The detailed information of tRNA gene sequence


Sequence ID>SRA1013555
Genome IDSRR023396.200706
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 1
End posion on genome 73
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GCGGACATAACTCAGCGGTAGAGTACGAGCTTCCCAAGCTCGGTGTCGCGGGTTCGAATC
CCGTTGTCCGCTCtt
Downstream region at tRNA end position 
tttccatcat
Secondary structure (Cloverleaf model)
>SRA1013555	Gly	CCC
                   n      TCtt tttccatcat
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     T G C C C     A
        G A        A      + | | | |     G
      C     C T C A       G C G G G     C
      G     | | | |                 T T
      G     G A G T
        T A        A     GTGTC
                    C - G
                    G - C
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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