The detailed information of tRNA gene sequence


Sequence ID>SRA1013556
Genome IDSRR023396.201476
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 115
End posion on genome 43
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
atgatagtat
tRNA gene sequence 
GTCCCCGTAGTTCAATGGAGAGAACACTAGCCTTCTAAGCTGGATATGCGCGTTCGACTC
GCGCCGGGGGCACtt
Downstream region at tRNA end position 
tatggcggtc
Secondary structure (Cloverleaf model)
>SRA1013556	Arg	TCT
                   t      ACtt tatggcggtc
                     G - C
                     T + G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T C
                    T     C G C G C     A
      T A A        A      | | | | |     G
    G       C T T G       G C G C G     C
    G       | | | |                 T T
    A       G A A C
      G A          A     ATAT
                    C - G
                    T + G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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