The detailed information of tRNA gene sequence


Sequence ID>SRA1013559
Genome IDSRR023396.208669
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 80
End posion on genome 155
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
aagcaaaagg
tRNA gene sequence 
GCCACCGTAGCTCAGATGGCAGAGCACCTCACTCGTAATGAGGATGTCGGCGGTTCGATC
CCGCCCGGTGGCTCCA
Downstream region at tRNA end position 
aaatcttgac
Secondary structure (Cloverleaf model)
>SRA1013559	Thr	CGT
                   g      TCCA aaatcttgac
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     C - G
                     G - C          C T
                    T     C C G C C     A
      A G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     ATGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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