The detailed information of tRNA gene sequence


Sequence ID>SRA1013563
Genome IDSRR023396.215717
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 21
End posion on genome 97
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ggcctcttat
tRNA gene sequence 
GCGCCCGTAGCTCAATGGATAGAGCAGGGGCTTCCTAAGCCCCTTGGTTGGACGTTCGAC
TCTTCTCGGGCGTACCA
Downstream region at tRNA end position 
tttttataat
Secondary structure (Cloverleaf model)
>SRA1013563	Arg	CCT
                   t      ACCA tttttataat
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T C
                    T     T C T T C     A
      T A A        A      + | |   |     G
    G       C T C G       G G A C G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     TTGGTT
                    G - C
                    G - C
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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