The detailed information of tRNA gene sequence


Sequence ID>SRA1013587
Genome IDSRR023396.251213
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 127
End posion on genome 36
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aacgacttaC
tRNA gene sequence 
GGTGAGGTGTCTGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGCTAACGCGTA
TCGAGGGTTCGAACCCCTCTCTCACCGTCC
Downstream region at tRNA end position 
Aaataaatag
Secondary structure (Cloverleaf model)
>SRA1013587	Ser	GGA
                   C      GTCC Aaataaatag
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G + T          C A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C T       G A G G G     C
    G         + | |                 T T
    C       A G G A
      T G A        G     TATACGCTAACGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK