The detailed information of tRNA gene sequence


Sequence ID>SRA1013590
Genome IDSRR023396.254821
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 84
End posion on genome 8
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tgagcaagcg
tRNA gene sequence 
GGCCCGGTCGTCTAGCTTGGTAGGACATCTGCTTGACGTGCAGAAGGTCGCTGGTTCAAA
TCCGGCCCGGCCCACCA
Downstream region at tRNA end position 
atattttnnn
Secondary structure (Cloverleaf model)
>SRA1013590	Val	GAC
                   g      ACCA atattttnnn
                     G - C
                     G - C
                     C   C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G G C C     A
      C G A        C      | | + | |     A
    T       T C T G       G C T G G     C
    T       + | | |                 T T
    G       G G A C
      G T A        A     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       T
                  T       G
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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