The detailed information of tRNA gene sequence


Sequence ID>SRA1013598
Genome IDSRR023396.274821
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 72
End posion on genome 149
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gttggtcggt
tRNA gene sequence 
GGGTCCGTAGCTCAGCAAGGTCAGAGCGGTGGCCTCTTAAGCCATTGGCCGAGGGTTCGA
ATCCCTCCGGACCCGCCA
Downstream region at tRNA end position 
gttctcttga
Secondary structure (Cloverleaf model)
>SRA1013598	Lys	CTT
                   t      GCCA gttctcttga
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
    A C G A        A      | | | | |     G
  A         C T C G       G A G G G     C
  G         | | | |                 T T
  G         G A G C
    T C A          G     TGGCC
                    G + T
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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