The detailed information of tRNA gene sequence


Sequence ID>SRA1013621
Genome IDSRR023396.305699
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 49
End posion on genome 123
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gttatggtgt
tRNA gene sequence 
GCCGCCGTAGCTCAGCTAGGTAGAGCGTCTGGCTGTTAACCAGTTGGTCATAGGTTCGAG
TCCTATCGGCGGCGCtt
Downstream region at tRNA end position 
ttactgtatt
Secondary structure (Cloverleaf model)
>SRA1013621	Asn	GTT
                   t      GCtt ttactgtatt
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     T A T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T A G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        G     TGGTC
                    T   T
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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