The detailed information of tRNA gene sequence


Sequence ID>SRA1013625
Genome IDSRR023396.310096
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 188
End posion on genome 264
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acaaagacat
tRNA gene sequence 
GGCGGTGTAGCTCAGATGGTTAGAGCATGCGGCTCATATCCGCAGTGTCCGGGGTTCAAT
TCCCTGCACCGCCACCA
Downstream region at tRNA end position 
tttttnnnnn
Secondary structure (Cloverleaf model)
>SRA1013625	Met	CAT
                   t      ACCA tttttnnnnn
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     G T C C C     A
      A G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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