The detailed information of tRNA gene sequence


Sequence ID>SRA1013630
Genome IDSRR023396.315551
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 182
End posion on genome 258
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cgcaaacagg
tRNA gene sequence 
GGGCCGGTCGTCTAGCTCGGTAGGACATTGGCTTTACGAGCCAAAGGTCGCTGGTTCAAG
TCCGGCCCGGCCCACCA
Downstream region at tRNA end position 
taacaagcct
Secondary structure (Cloverleaf model)
>SRA1013630	Val	TAC
                   g      ACCA taacaagcct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     C G G C C     A
      C G A        C      | | + | |     A
    T       T C T G       G C T G G     C
    C       + | | |                 T T
    G       G G A C
      G T A        A     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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