The detailed information of tRNA gene sequence


Sequence ID>SRA1013644
Genome IDSRR023396.335093
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 89
End posion on genome 165
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
actctctatg
tRNA gene sequence 
GTGAGTGTCGCCTAGTGGTCTAAGGCGCCAGGTTGTGGCCCTGGAGAACGAGGGTTCAAA
TCCCTCCACTCACCCCA
Downstream region at tRNA end position 
tcaatttagc
Secondary structure (Cloverleaf model)
>SRA1013644	His	GTG
                   g      CCCA tcaatttagc
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C T C C C     A
      T G A        C      | | | | |     A
    G       T C C G       G A G G G     C
    G       | | | |                 T T
    T       A G G C
      C T A        G     AGAAC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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