The detailed information of tRNA gene sequence


Sequence ID>SRA1013645
Genome IDSRR023396.335093
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 174
End posion on genome 249
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
catcaattta
tRNA gene sequence 
GCGCCTATAGCTCAGTGGATAGAGCATCGGTCTTCGGAACCGAGGGTCGTGGGTTCGAAT
CCCTCTAGGCGCGCCA
Downstream region at tRNA end position 
gcgaattaga
Secondary structure (Cloverleaf model)
>SRA1013645	Arg	TCG
                   a      GCCA gcgaattaga
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T A
                    T     C T C C C     A
      T G A        A      |   | | |     G
    G       C T C G       G T G G G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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