The detailed information of tRNA gene sequence


Sequence ID>SRA1013648
Genome IDSRR023396.342692
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 183
End posion on genome 260
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tagaaataaa
tRNA gene sequence 
GGGCCGGTAGTCTAGCCCGGTTAGGACATCTGCTTGACGTGCAGAAGGTCGCTGGTTCAA
ATCCGGCCCGGCCCACCA
Downstream region at tRNA end position 
cgcttttatc
Secondary structure (Cloverleaf model)
>SRA1013648	Val	GAC
                   a      ACCA cgcttttatc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G G C C     A
    C C G A        A      | | + | |     A
  C         T C T G       G C T G G     C
  G         + | | |                 T T
  G         G G A C
    T T A          A     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       T
                  T       G
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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