The detailed information of tRNA gene sequence


Sequence ID>SRA1013653
Genome IDSRR023396.349906
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 108
End posion on genome 180
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tagatgggtt
tRNA gene sequence 
GGGCGATTAGCTCAGGGGTAGAGCGCTACCTTCACACGGTAGAAGTCGCAGGTTCAAATC
CTGCATCGCCCACat
Downstream region at tRNA end position 
attgtttnnn
Secondary structure (Cloverleaf model)
>SRA1013653	Val	CAC
                   t      ACat attgtttnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     C G T C C     A
        G A        A      | | | | |     A
      G     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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