The detailed information of tRNA gene sequence


Sequence ID>SRA1013655
Genome IDSRR023396.352290
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 100
End posion on genome 177
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gtatggtttt
tRNA gene sequence 
GGGCGGGTAGATCAGCTTGGAATGATCGCGGCGTTGGCATCGCCGAGGTCACGGGTTCAA
ATCCCGTCCCGTCCACCA
Downstream region at tRNA end position 
tttaatggat
Secondary structure (Cloverleaf model)
>SRA1013655	Ala	GGC
                   t      ACCA tttaatggat
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     T G C C C     A
    T C G A        A      | | | | |     A
  T         C T A G       A C G G G     C
  G         | | | |                 T T
  G         G A T C
    A A T          G     AGGTC
                    C - G
                    G - C
                    G - C
                    C - G
                    G - C
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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