The detailed information of tRNA gene sequence


Sequence ID>SRA1013660
Genome IDSRR023396.358683
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 96
End posion on genome 24
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cccgctccac
tRNA gene sequence 
GGGCTCGTAGCTCAGTGGTAGAGCGGTCGGCTCATAACCGATTGGTCGCAGGTTCGAACC
CTGCCGAGCCCACtt
Downstream region at tRNA end position 
aatttgcgca
Secondary structure (Cloverleaf model)
>SRA1013660	Met	CAT
                   c      ACtt aatttgcgca
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          C A
                    T     C G T C C     A
        G A        A      | | | | |     G
      T     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     TGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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