The detailed information of tRNA gene sequence


Sequence ID>SRA1013661
Genome IDSRR023396.358759
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 127
End posion on genome 219
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgcctttttg
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGTCGAAAGCGATTGATTCGAAATCAATTGAGTGCCTCAAAGGT
GCTCCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
attggtaaaa
Secondary structure (Cloverleaf model)
>SRA1013661	Ser	CGA
                   g      GCCA attggtaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGAGTGCCTCAAAGGTGCTCC
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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