The detailed information of tRNA gene sequence


Sequence ID>SRA1013674
Genome IDSRR023396.370765
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 278
End posion on genome 202
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ccttttcatg
tRNA gene sequence 
GTGAGCGTAGCTCAACTGGTTAGAGCATCGGACTGTGGATCCGAAGGTTGGGGGTTCGAG
ACCCCTCGCTCACCCCA
Downstream region at tRNA end position 
ccctaaaccc
Secondary structure (Cloverleaf model)
>SRA1013674	His	GTG
                   g      CCCA ccctaaaccc
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          A G
                    T     T C C C C     A
      C A A        A      + | | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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