The detailed information of tRNA gene sequence


Sequence ID>SRA1013677
Genome IDSRR023396.377166
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 242
End posion on genome 166
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tgtagcaagc
tRNA gene sequence 
GGGCCGGTCGTCTAGCTTGGTAGGACATCTGCTTGACGTGCAGAAGGTCGCTGGTTCAAA
TCCGGCCCGGCCCACCA
Downstream region at tRNA end position 
atattttgga
Secondary structure (Cloverleaf model)
>SRA1013677	Val	GAC
                   c      ACCA atattttgga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G G C C     A
      C G A        C      | | + | |     A
    T       T C T G       G C T G G     C
    T       + | | |                 T T
    G       G G A C
      G T A        A     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       T
                  T       G
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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