The detailed information of tRNA gene sequence


Sequence ID>SRA1013684
Genome IDSRR023396.385457
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 55
End posion on genome 128
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
ataggtgtca
tRNA gene sequence 
GCCCCTGTAGCTCAGGTGGATAGAGCACCAGCCTCCGGAGCTGGGTGCGAGCGTTCAAGT
CGCTCCAGGGGCGCtt
Downstream region at tRNA end position 
tttatgataa
Secondary structure (Cloverleaf model)
>SRA1013684	Arg	CCG
                   a      GCtt tttatgataa
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C T C G C     A
      G G A        A      | | | | |     A
    T       C T C G       G A G C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GTGC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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